Turns f2_data into f2_blocks — get_f2 • admixtools

Turns f2_data into f2_blocks

get_f2(f2_data, pops = NULL, pops2 = NULL, afprod = FALSE, verbose = TRUE, ...)

Arguments

f2_data: f2 data as genotype file prefix, f2 directory, or f2 blocks
pops: Populations for which to extract f2-stats (defaults to all)
pops2: Optional second vector of populations. Can result in non-square array
afprod: Get allele frequency products
verbose: Print progress updates
...: Additional arguments passed to f2_from_precomp or f2_from_geno

Value

A 3d array with f2-statistics